Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Blood
Cell type
BLUE-1
Primary Tissue
Blood
Tissue Diagnosis
Malignant Lymphoma - Burkitts Type

Attributes by original data submitter

Sample

source_name
Blue1
strain
B-cell lymphoma cell line
cell type
B-cell
chip antibody
MYC antibody (N-262 Santa Cruz, CA, USA)

Sequenced DNA Library

library_name
GSM762709: Blue1_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
2524288
Reads aligned (%)
88.2
Duplicates removed (%)
1.7
Number of peaks
1482 (qval < 1E-05)

hg38

Number of total reads
2524288
Reads aligned (%)
89.8
Duplicates removed (%)
1.1
Number of peaks
1471 (qval < 1E-05)

Base call quality data from DBCLS SRA