SRX093320
GSM783263: Input DNA

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
normal human lung fibroblasts
cell line
IMR90
pdl
38-40
chip antibody
none

Sequenced DNA Library

library_name
GSM783263: Input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
11760480
Reads aligned (%)
92.9
Duplicates removed (%)
11.0
Number of peaks
109 (qval < 1E-05)

hg19

Number of total reads
11760480
Reads aligned (%)
92.1
Duplicates removed (%)
12.3
Number of peaks
428 (qval < 1E-05)

Base call quality data from DBCLS SRA