Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CEBPB

Cell type

Cell type Class
Blood
Cell type
Macrophages
MeSH Description
The relatively long-lived phagocytic cell of mammalian tissues that are derived from blood MONOCYTES. Main types are PERITONEAL MACROPHAGES; ALVEOLAR MACROPHAGES; HISTIOCYTES; KUPFFER CELLS of the liver; and OSTEOCLASTS. They may further differentiate within chronic inflammatory lesions to EPITHELIOID CELLS or may fuse to form FOREIGN BODY GIANT CELLS or LANGHANS GIANT CELLS. (from The Dictionary of Cell Biology, Lackie and Dow, 3rd ed.)

Attributes by original data submitter

Sample

source_name
Monocyte-derived macrophage
chip antibody
C/EBPbeta
cell type
Monocyte-derived macrophage

Sequenced DNA Library

library_name
GSM785502: MAC C/EBPbeta
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
40560009
Reads aligned (%)
30.6
Duplicates removed (%)
32.6
Number of peaks
27545 (qval < 1E-05)

hg38

Number of total reads
40560009
Reads aligned (%)
31.4
Duplicates removed (%)
31.5
Number of peaks
27381 (qval < 1E-05)

Base call quality data from DBCLS SRA