Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Embryonic brains
NA
NA

Attributes by original data submitter

Sample

source_name
NSCs & pOLs
strain
C57BL/6
cell type
eNSCs & p2-pOLs
passage
eNSCs: 2-3 & p2-pOLs: 0
chip antibody
IgG (isotypic control antibody) [Abcam; Cat. no.: ab46540]

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
8293125
Reads aligned (%)
28.7
Duplicates removed (%)
48.7
Number of peaks
2618 (qval < 1E-05)

mm9

Number of total reads
8293125
Reads aligned (%)
28.6
Duplicates removed (%)
49.3
Number of peaks
2516 (qval < 1E-05)

Base call quality data from DBCLS SRA