SRX092597
GSM777091: G1ME GATA2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gata2

Cell type

Cell type Class
Blood
Cell type
G1ME
NA
NA

Attributes by original data submitter

Sample

source_name
Megakaryocyte Progenitor Cell Line (G1ME)
cell line
G1ME
Stage
Progenitor, GATA1-null
antibody
anti-GATA2
antibody catalog number
sc-9008
antibody vendor
Santa Cruz

Sequenced DNA Library

library_name
GSM777091: G1ME_GATA2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
15227209
Reads aligned (%)
87.6
Duplicates removed (%)
9.9
Number of peaks
3626 (qval < 1E-05)

mm9

Number of total reads
15227209
Reads aligned (%)
87.4
Duplicates removed (%)
10.1
Number of peaks
3665 (qval < 1E-05)

Base call quality data from DBCLS SRA