Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
input DNA
strain
C57BL/6
tissue
spleen
cell type
primary CD4 T cells
culture condition
Th1

Sequenced DNA Library

library_name
GSM773487: input DNA_Th1_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
14477026
Reads aligned (%)
96.8
Duplicates removed (%)
25.3
Number of peaks
484 (qval < 1E-05)

mm9

Number of total reads
14477026
Reads aligned (%)
96.6
Duplicates removed (%)
25.4
Number of peaks
545 (qval < 1E-05)

Base call quality data from DBCLS SRA