SRX092584
GSM773483: input DNA Th1 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
input DNA
strain
C57BL/6
tissue
spleen
cell type
primary CD4 T cells
culture condition
Th1

Sequenced DNA Library

library_name
GSM773483: input DNA_Th1_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
9275512
Reads aligned (%)
97.2
Duplicates removed (%)
10.9
Number of peaks
417 (qval < 1E-05)

mm9

Number of total reads
9275512
Reads aligned (%)
97.0
Duplicates removed (%)
11.2
Number of peaks
475 (qval < 1E-05)

Base call quality data from DBCLS SRA