Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Tcf7

Cell type

Cell type Class
Blood
Cell type
EML
NA
NA

Attributes by original data submitter

Sample

source_name
EML cells
sequence type
Illumina; single-end;35bp reads
antibody
TCF7 goat polyclonal antibody TCF1(H18)
vendor
Santa Cruz Biotechnology
catalog
SC8589
cell type
Lin-SCA+CD34+ cells

Sequenced DNA Library

library_name
GSM773994: TCF7_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
20828473
Reads aligned (%)
83.6
Duplicates removed (%)
18.6
Number of peaks
7505 (qval < 1E-05)

mm9

Number of total reads
20828473
Reads aligned (%)
83.4
Duplicates removed (%)
18.8
Number of peaks
7462 (qval < 1E-05)

Base call quality data from DBCLS SRA