SRX092453
GSM729854: RBPJ ChIP-seq 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RBPJ

Cell type

Cell type Class
Blood
Cell type
IB4
NA
NA

Attributes by original data submitter

Sample

source_name
IB4 cells
cell line
IB4
cell type
EBV immotalized lymphocyte
antibody
Rabbit anti RBPJ

Sequenced DNA Library

library_name
GSM729854: RBPJ ChIP-seq 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13382267
Reads aligned (%)
67.0
Duplicates removed (%)
6.2
Number of peaks
14066 (qval < 1E-05)

hg19

Number of total reads
13382267
Reads aligned (%)
66.6
Duplicates removed (%)
6.6
Number of peaks
14640 (qval < 1E-05)

Base call quality data from DBCLS SRA