Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RBPJ

Cell type

Cell type Class
Blood
Cell type
IB4
NA
NA

Attributes by original data submitter

Sample

source_name
IB4 cells
cell line
IB4
cell type
EBV immotalized lymphocyte
antibody
Rabbit anti RBPJ

Sequenced DNA Library

library_name
GSM729853: RBPJ ChIP-seq 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
7851123
Reads aligned (%)
47.3
Duplicates removed (%)
4.7
Number of peaks
5956 (qval < 1E-05)

hg38

Number of total reads
7851123
Reads aligned (%)
47.9
Duplicates removed (%)
4.3
Number of peaks
5573 (qval < 1E-05)

Base call quality data from DBCLS SRA