Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Th1 Cells

MeSH Description

A subset of helper-inducer T-lymphocytes which synthesize and secrete INTERLEUKIN-2; INTERFERON-GAMMA; and INTERLEUKIN-12. Due to their ability to kill antigen-presenting cells and their lymphokine-mediated effector activity, Th1 cells are associated with vigorous delayed-type hypersensitivity reactions.

Sample

source_name

Th1 cells

chip antibody

None

cell type

Th1

cell number

100000000

Sequenced DNA Library

library_name

GSM776555: Th1_WCE

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

24546787

Reads aligned (%)

81.1

Duplicates removed (%)

5.0

Number of peaks

1487 (qval < 1E-05)

hg19

Number of total reads

24546787

Reads aligned (%)

80.5

Duplicates removed (%)

6.0

Number of peaks

1506 (qval < 1E-05)