Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
ChIP-Seq_Carrier_EBV-transformed_IgG
genotype/variation
translocation t(8;20)(p12;q11.23) carriers
tissue
whole blood
cell type
EBV-Transformed B lymphocytes
chip antibody
IgG

Sequenced DNA Library

library_name
GSM773478: ChIP-Seq_Sample_1_IgG
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
3968419
Reads aligned (%)
72.6
Duplicates removed (%)
77.9
Number of peaks
6 (qval < 1E-05)

hg19

Number of total reads
3968419
Reads aligned (%)
72.2
Duplicates removed (%)
78.5
Number of peaks
11 (qval < 1E-05)

Base call quality data from DBCLS SRA