SRX091893
GSM774941: TAF3 Mock IP, ES Cells

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cells, TAF3 mock
strain
D3
cell type
embryonic stem cells
chip antibody
mock IgG

Sequenced DNA Library

library_name
GSM774941: TAF3 Mock IP, ES Cells
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
60580740
Reads aligned (%)
94.6
Duplicates removed (%)
58.6
Number of peaks
773 (qval < 1E-05)

mm9

Number of total reads
60580740
Reads aligned (%)
94.3
Duplicates removed (%)
58.7
Number of peaks
865 (qval < 1E-05)

Base call quality data from DBCLS SRA