SRX091679
GSM774298: FLDN1 Input sample1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4 CD8 double negative cells
NA
NA

Attributes by original data submitter

Sample

source_name
FLDN1
strain
C57BL/6
genetic background
wildtype
cell type
Fetal liver precursor derived DN1
chip antibody
None

Sequenced DNA Library

library_name
GSM774298: FLDN1_Input_sample1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
16628945
Reads aligned (%)
61.2
Duplicates removed (%)
7.4
Number of peaks
563 (qval < 1E-05)

mm9

Number of total reads
16628945
Reads aligned (%)
61.0
Duplicates removed (%)
7.5
Number of peaks
630 (qval < 1E-05)

Base call quality data from DBCLS SRA