SRX085411
GSM762849: Input 20HE 0hrs ChIPSeq2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc cells
chip antibody
none
cell type
Kc167 Drosophila Embryonic Cell line
ecdysone treatment
none

Sequenced DNA Library

library_name
GSM762849: Input_20HE_0hrs_ChIPSeq2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
21464648
Reads aligned (%)
36.5
Duplicates removed (%)
13.5
Number of peaks
2353 (qval < 1E-05)

dm3

Number of total reads
21464648
Reads aligned (%)
40.8
Duplicates removed (%)
19.0
Number of peaks
2732 (qval < 1E-05)

Base call quality data from DBCLS SRA