SRX085409
GSM762847: BEAF-32 20HE 48hrs ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BEAF-32

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc cells
chip antibody
anti-BEAF32B
chip antibody supplier
Generated by the Corces lab. Bushey et al. 2009
cell type
Kc167 Drosophila Embryonic Cell line
ecdysone treatment
48 hours

Sequenced DNA Library

library_name
GSM762847: BEAF-32_20HE_48hrs_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
39823483
Reads aligned (%)
91.4
Duplicates removed (%)
74.6
Number of peaks
9978 (qval < 1E-05)

dm6

Number of total reads
39823483
Reads aligned (%)
91.3
Duplicates removed (%)
75.9
Number of peaks
9936 (qval < 1E-05)

Base call quality data from DBCLS SRA