Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Cp190

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc cells
chip antibody
anti-CP190
chip antibody supplier
Generated by the Corces lab. Pai et al. 2004
cell type
Kc167 Drosophila Embryonic Cell line
ecdysone treatment
3 hours

Sequenced DNA Library

library_name
GSM762837: CP190_20HE_3hrs_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm3

Number of total reads
21327048
Reads aligned (%)
64.3
Duplicates removed (%)
65.2
Number of peaks
11989 (qval < 1E-05)

dm6

Number of total reads
21327048
Reads aligned (%)
64.1
Duplicates removed (%)
66.5
Number of peaks
11966 (qval < 1E-05)

Base call quality data from DBCLS SRA