Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Cp190

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc cells
chip antibody
anti-CP190
chip antibody supplier
Generated by the Corces lab. Pai et al. 2004
cell type
Kc167 Drosophila Embryonic Cell line
ecdysone treatment
none

Sequenced DNA Library

library_name
GSM762836: CP190_20HE_0hrs_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm3

Number of total reads
20136766
Reads aligned (%)
40.2
Duplicates removed (%)
68.5
Number of peaks
9929 (qval < 1E-05)

dm6

Number of total reads
20136766
Reads aligned (%)
39.9
Duplicates removed (%)
69.8
Number of peaks
9281 (qval < 1E-05)

Base call quality data from DBCLS SRA