SRX084607
GSM763429: OCI-LY1 Ser2/Ser5-P PolII INPUT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
OCI-LY1
NA
NA

Attributes by original data submitter

Sample

source_name
Human DLBCL cell line
cell line
OCI-LY1
chip antibody
none (INPUT)

Sequenced DNA Library

library_name
GSM763429: OCI-LY1_Ser2/Ser5-P_PolII_INPUT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
49064798
Reads aligned (%)
87.8
Duplicates removed (%)
10.6
Number of peaks
1965 (qval < 1E-05)

hg19

Number of total reads
49064798
Reads aligned (%)
86.9
Duplicates removed (%)
12.6
Number of peaks
2075 (qval < 1E-05)

Base call quality data from DBCLS SRA