Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HIV Tat

Cell type

Cell type Class
Blood
Cell type
Jurkat
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
Jurkat-Tat T cells
expression
HIV Tat protein
chip antibody
Tat
cell line
Jurkat
chip antibody manufacturer
Abcam

Sequenced DNA Library

library_name
GSM762835: Tat ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
44360277
Reads aligned (%)
67.8
Duplicates removed (%)
7.2
Number of peaks
528 (qval < 1E-05)

hg19

Number of total reads
44360277
Reads aligned (%)
67.5
Duplicates removed (%)
7.9
Number of peaks
523 (qval < 1E-05)

Base call quality data from DBCLS SRA