Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Lgr1

Cell type

Cell type Class
Cell line
Cell type
S2-DRSC
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
DRSC-S2 cell line
cell line
DRSC-S2 cell line
chip antibody
FSH_ID173 [raised against protein 4.1 (recognizes FSH-L only)]
chip antibody supplier
gift from Igor Dawid

Sequenced DNA Library

library_name
GSM764319: DmS2DRSC_ChIP_FSH_ID173
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

dm3

Number of total reads
52414696
Reads aligned (%)
23.8
Duplicates removed (%)
63.2
Number of peaks
13802 (qval < 1E-05)

dm6

Number of total reads
52414696
Reads aligned (%)
21.2
Duplicates removed (%)
67.0
Number of peaks
11897 (qval < 1E-05)

Base call quality data from DBCLS SRA