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Install and launch IGV before selecting data to visualize
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: ash1
wikigenes
PDBj
CellType: S2-DRSC
ATCC
MeSH
RIKEN BRC
SRX084580
GSM764317: DmS2DRSC ChIP Ash1N
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
ash1
Cell type
Cell type Class
Cell line
Cell type
S2-DRSC
Source
Oregon R
Developmental Stage
late embryonic stage
Attributes by original data submitter
Sample
source_name
DRSC-S2 cell line
cell line
DRSC-S2 cell line
chip antibody
Ash1N
chip antibody supplier
gift from Frank Sauer, Riverside
Sequenced DNA Library
library_name
GSM764317: DmS2DRSC_ChIP_Ash1N
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer IIx
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
40556877
Reads aligned (%)
67.7
Duplicates removed (%)
50.3
Number of peaks
13406 (qval < 1E-05)
dm3
Number of total reads
40556877
Reads aligned (%)
68.1
Duplicates removed (%)
46.9
Number of peaks
15002 (qval < 1E-05)
Base call quality data from
DBCLS SRA