SRX084525
GSM738821: RWPE1 ETS1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ETS1

Cell type

Cell type Class
Prostate
Cell type
RWPE-1
Primary Tissue
Prostate
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
RWPE1_ETS1
cell line
RWPE-1
antibody
ETS1(Santa Cruz Biotechnology, cat# sc-350, lot# E1010)
retroviral expression
None

Sequenced DNA Library

library_name
GSM738821: RWPE1 ETS1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
10178521
Reads aligned (%)
98.0
Duplicates removed (%)
14.7
Number of peaks
485 (qval < 1E-05)

hg19

Number of total reads
10178521
Reads aligned (%)
97.5
Duplicates removed (%)
15.2
Number of peaks
516 (qval < 1E-05)

Base call quality data from DBCLS SRA