Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ETV4

Cell type

Cell type Class
Prostate
Cell type
PC-3
Primary Tissue
Prostate
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
PC3_ETV4
cell line
PC3
antibody
ETV4(Aviva Systems Biology, cat# ARP32263, lot# QC1723)
retroviral expression
None

Sequenced DNA Library

library_name
GSM738817: PC3 ETV4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
8319357
Reads aligned (%)
87.0
Duplicates removed (%)
11.7
Number of peaks
1350 (qval < 1E-05)

hg38

Number of total reads
8319357
Reads aligned (%)
87.6
Duplicates removed (%)
11.3
Number of peaks
1328 (qval < 1E-05)

Base call quality data from DBCLS SRA