Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryo
Cell type
Forelimb
MeSH Description
A front limb of a quadruped. (The Random House College Dictionary, 1980)

Attributes by original data submitter

Sample

source_name
embryonic forelimb bud, H3K27me3 ChIP
strain
C57BL/6J
tissue
forelimb bud
developmental stage
gestational day E10.5
chip antibody
anti-H3K27me3
antibody vendor
Millipore
sequencing run type
Single-end 75

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
43086839
Reads aligned (%)
99.1
Duplicates removed (%)
19.7
Number of peaks
1253 (qval < 1E-05)

mm9

Number of total reads
43086839
Reads aligned (%)
98.9
Duplicates removed (%)
19.7
Number of peaks
1282 (qval < 1E-05)

Base call quality data from DBCLS SRA