Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Embryo
Cell type
Forelimb
MeSH Description
A front limb of a quadruped. (The Random House College Dictionary, 1980)

Attributes by original data submitter

Sample

source_name
embryonic forelimb bud, H3K27ac ChIP
strain
C57BL/6J
tissue
forelimb bud
developmental stage
gestational day E10.5
chip antibody
anti-H3K27ac
antibody vendor
Abcam
sequencing run type
Paired-end 75 multiplexed

Sequenced DNA Library

library_name
GSM759864: E10.5_forelimb_H3K27ac_ChIP_seq_rep1_index_6
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
15785327
Reads aligned (%)
98.1
Duplicates removed (%)
12.8
Number of peaks
846 (qval < 1E-05)

mm9

Number of total reads
15785327
Reads aligned (%)
98.0
Duplicates removed (%)
12.7
Number of peaks
807 (qval < 1E-05)

Base call quality data from DBCLS SRA