Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Forelimb
MeSH Description
A front limb of a quadruped. (The Random House College Dictionary, 1980)

Attributes by original data submitter

Sample

source_name
embryonic forelimb bud, ChIP input
strain
C57BL/6J
tissue
forelimb bud
developmental stage
gestational day E10.5
chip antibody
none
sequencing run type
Paired-end 75 multiplexed

Sequenced DNA Library

library_name
GSM759861: E10.5_forelimb_ChIP_input_rep4_index4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
17241433
Reads aligned (%)
98.2
Duplicates removed (%)
15.3
Number of peaks
184 (qval < 1E-05)

mm9

Number of total reads
17241433
Reads aligned (%)
98.1
Duplicates removed (%)
15.2
Number of peaks
144 (qval < 1E-05)

Base call quality data from DBCLS SRA