SRX083252
GSM758726: CD4 H3K4me3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mature CD4+ T cells
strain
C57BL/6
cell type
Mature CD4+ T cells from thymus
chip antibody
H3K4me3

Sequenced DNA Library

library_name
GSM758726: CD4 H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
13229172
Reads aligned (%)
97.7
Duplicates removed (%)
46.6
Number of peaks
27287 (qval < 1E-05)

mm9

Number of total reads
13229172
Reads aligned (%)
97.5
Duplicates removed (%)
46.7
Number of peaks
27314 (qval < 1E-05)

Base call quality data from DBCLS SRA