SRX083251
GSM758725: CD4 input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mature CD4+ T cells
strain
C57BL/6
cell type
Mature CD4+ T cells from thymus
chip antibody
none

Sequenced DNA Library

library_name
GSM758725: CD4 input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
14361031
Reads aligned (%)
97.9
Duplicates removed (%)
13.1
Number of peaks
355 (qval < 1E-05)

mm9

Number of total reads
14361031
Reads aligned (%)
97.7
Duplicates removed (%)
13.2
Number of peaks
375 (qval < 1E-05)

Base call quality data from DBCLS SRA