Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
FOS

Cell type

Cell type Class
Blood
Cell type
GM12878
Tissue
blood
Lineage
mesoderm
Description
B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Attributes by original data submitter

Sample

source_name
Lymphoblastoid cell-line
cell-type
GM12878
description
lymphoblastoid cell-line derived from NA12878
antibody
c-Fos

Sequenced DNA Library

library_name
GSM754332: cFos ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
10045022
Reads aligned (%)
73.2
Duplicates removed (%)
3.8
Number of peaks
1589 (qval < 1E-05)

hg38

Number of total reads
10045022
Reads aligned (%)
75.1
Duplicates removed (%)
3.2
Number of peaks
1444 (qval < 1E-05)

Base call quality data from DBCLS SRA