SRX080429
GSM749766: Stam WERI-Rb-1 Input 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
WERI-Rb-1
Primary Tissue
Eye
Tissue Diagnosis
Retinoblastoma

Attributes by original data submitter

Sample

source_name
WERI-Rb-1
biomaterial_provider
ATCC
cell
WERI-Rb-1
cell organism
Human
cell description
retinoblastoma (PMID: 844036)
cell sex
F
antibody
Input
replicate
1

Sequenced DNA Library

library_name
GSM749766: Stam_WERI-Rb-1_Input_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
19465137
Reads aligned (%)
97.7
Duplicates removed (%)
2.4
Number of peaks
441 (qval < 1E-05)

hg19

Number of total reads
19465137
Reads aligned (%)
96.9
Duplicates removed (%)
3.8
Number of peaks
768 (qval < 1E-05)

Base call quality data from DBCLS SRA