SRX080426
GSM749763: Stam HMF Input 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Breast
Cell type
HMF
Tissue
mammary
Description
mammary fibroblasts

Attributes by original data submitter

Sample

source_name
HMF
biomaterial_provider
ScienCell
cell
HMF
cell organism
Human
cell description
human mammary fibroblasts
cell sex
F
antibody
Input
replicate
1

Sequenced DNA Library

library_name
GSM749763: Stam_HMF_Input_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
11577599
Reads aligned (%)
85.8
Duplicates removed (%)
1.0
Number of peaks
399 (qval < 1E-05)

hg19

Number of total reads
11577599
Reads aligned (%)
84.5
Duplicates removed (%)
1.8
Number of peaks
547 (qval < 1E-05)

Base call quality data from DBCLS SRA