Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

GM12875

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed

Sample

source_name

GM12875

biomaterial_provider

GM12875

cell

GM12875

cell organism

Human

cell description

B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed

cell karyotype

unknown

cell lineage

mesoderm

cell sex

F

antibody

Input

replicate

1

Sequenced DNA Library

library_name

GSM749724: Stam_GM12875_Input_1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

17054809

Reads aligned (%)

98.5

Duplicates removed (%)

1.5

Number of peaks

876 (qval < 1E-05)

hg19

Number of total reads

17054809

Reads aligned (%)

97.6

Duplicates removed (%)

2.8

Number of peaks

1138 (qval < 1E-05)