Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Neural
Cell type
HA-sp
Tissue
spinal cord
Lineage
ectoderm
Description
astrocytes spinal cord

Attributes by original data submitter

Sample

source_name
HA-sp
biomaterial_provider
ScienCell
cell
HA-sp
cell organism
Human
cell description
Human astrocytes spinal cord
cell karyotype
normal
cell lineage
Astrocytic
cell sex
U
antibody
Input
replicate
1

Sequenced DNA Library

library_name
GSM749720: Stam_HA-sp_Input_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
32808569
Reads aligned (%)
98.4
Duplicates removed (%)
1.9
Number of peaks
1074 (qval < 1E-05)

hg19

Number of total reads
32808569
Reads aligned (%)
97.3
Duplicates removed (%)
3.2
Number of peaks
1174 (qval < 1E-05)

Base call quality data from DBCLS SRA