Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Epidermis

Cell type

AG09309

Tissue

skin

Description

adult toe fibroblast from apparently healthy 21 year old, "7% of the cells examined showing random chromosome loss/gain" -Coriell

Sample

source_name

AG09309

biomaterial_provider

AG09309

cell

AG09309

cell organism

Human

cell description

adult toe fibroblast from apparently healthy 21 year old

cell karyotype

"7% of the cells examined showing random chromosome loss/gain" -Coriell

cell lineage

mesoderm

cell sex

F

antibody

Input

replicate

1

Sequenced DNA Library

library_name

GSM749718: Stam_AG09309_Input_1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

9730260

Reads aligned (%)

98.3

Duplicates removed (%)

1.0

Number of peaks

344 (qval < 1E-05)

hg19

Number of total reads

9730260

Reads aligned (%)

97.3

Duplicates removed (%)

2.1

Number of peaks

555 (qval < 1E-05)