Antigen

Antigen Class

TFs and others

Antigen

CTCF

Cell type

Cell type Class

Cardiovascular

Cell type

HUVEC

Primary Tissue

Umbilical Cord

Tissue Diagnosis

Normal

Sample

source_name

HUVEC

biomaterial_provider

Lonza

cell

HUVEC

cell organism

Human

cell description

umbilical vein endothelial cells

cell karyotype

normal

cell lineage

mesoderm

cell sex

U

antibody

CTCF

antibody description

rabbit polyclonal

antibody target description

CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.

antibody vendor name

Millipore

replicate

1

Sequenced DNA Library

library_name

GSM749674: Stam_HUVEC_CTCF_1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

14766443

Reads aligned (%)

92.9

Duplicates removed (%)

45.1

Number of peaks

39977 (qval < 1E-05)

hg19

Number of total reads

14766443

Reads aligned (%)

92.5

Duplicates removed (%)

45.8

Number of peaks

39930 (qval < 1E-05)