Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
KH2
strain
C57BL/6 (female) x 129/S (male)
cell type
mES
cell passage
10-18
chip antibody
none

Sequenced DNA Library

library_name
GSM749808: Pol_II_0hr_WCE_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
25630471
Reads aligned (%)
95.3
Duplicates removed (%)
25.9
Number of peaks
626 (qval < 1E-05)

mm9

Number of total reads
25630471
Reads aligned (%)
94.9
Duplicates removed (%)
25.9
Number of peaks
756 (qval < 1E-05)

Base call quality data from DBCLS SRA