SRX080160
GSM748556: K562 INPUT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562_INPUT
cell line
K562
cell type
chronic myeloid leukemia

Sequenced DNA Library

library_name
GSM748556: K562_INPUT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
16873734
Reads aligned (%)
96.0
Duplicates removed (%)
2.8
Number of peaks
490 (qval < 1E-05)

hg19

Number of total reads
16873734
Reads aligned (%)
95.2
Duplicates removed (%)
3.9
Number of peaks
673 (qval < 1E-05)

Base call quality data from DBCLS SRA