SRX080157
GSM748553: K562 cMYC REP3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562_cMYC
cell line
K562
cell type
chronic myeloid leukemia
chip_antibody_provider
Santa Cruz
chip_antibody_catalog
sc-764X
chip_antibody_lot
H107

Sequenced DNA Library

library_name
GSM748553: K562_cMYC_REP3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13407253
Reads aligned (%)
83.7
Duplicates removed (%)
26.8
Number of peaks
5220 (qval < 1E-05)

hg19

Number of total reads
13407253
Reads aligned (%)
82.9
Duplicates removed (%)
28.3
Number of peaks
5367 (qval < 1E-05)

Base call quality data from DBCLS SRA