Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562_cMYC
cell line
K562
cell type
chronic myeloid leukemia
chip_antibody_provider
Santa Cruz
chip_antibody_catalog
sc-764X
chip_antibody_lot
H107

Sequenced DNA Library

library_name
GSM748552: K562_cMYC_REP2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
12249806
Reads aligned (%)
62.9
Duplicates removed (%)
24.8
Number of peaks
6801 (qval < 1E-05)

hg38

Number of total reads
12249806
Reads aligned (%)
64.5
Duplicates removed (%)
23.6
Number of peaks
6698 (qval < 1E-05)

Base call quality data from DBCLS SRA