Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
HUVEC_cMYC
cell line
HUVEC
cell type
umbilical vein endothelial cells
chip_antibody_provider
Santa Cruz
chip_antibody_catalog
sc-764X
chip_antibody_lot
H107

Sequenced DNA Library

library_name
GSM748547: HUVEC_cMYC_REP1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
28007250
Reads aligned (%)
58.3
Duplicates removed (%)
12.6
Number of peaks
12283 (qval < 1E-05)

hg19

Number of total reads
28007250
Reads aligned (%)
57.9
Duplicates removed (%)
13.9
Number of peaks
12445 (qval < 1E-05)

Base call quality data from DBCLS SRA