SRX080141
GSM748537: HelaS3 INPUT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HelaS3_INPUT
cell line
HelaS3
cell type
cervical carcinoma

Sequenced DNA Library

library_name
GSM748537: HelaS3_INPUT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
12316660
Reads aligned (%)
93.3
Duplicates removed (%)
21.4
Number of peaks
406 (qval < 1E-05)

hg19

Number of total reads
12316660
Reads aligned (%)
92.5
Duplicates removed (%)
22.5
Number of peaks
521 (qval < 1E-05)

Base call quality data from DBCLS SRA