SRX080121
GSM748520: HUVEC FAIRE REP1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
umbilical vein endothelial cells
cell line
HUVEC
cell type
umbilical vein endothelial cells

Sequenced DNA Library

library_name
GSM748520: HUVEC_FAIRE_REP1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
58836870
Reads aligned (%)
95.7
Duplicates removed (%)
14.0
Number of peaks
2080 (qval < 1E-05)

hg19

Number of total reads
58836870
Reads aligned (%)
94.5
Duplicates removed (%)
16.4
Number of peaks
2292 (qval < 1E-05)

Base call quality data from DBCLS SRA