SRX080101
GSM749412: pGES-1 LIN-35 YL398 6-14-10 L1 rep2 Input CATT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
pGES-1 LIN-35:GFP:FLAG whole animal
strain
YL398
Stage
L1
chip antibody
None

Sequenced DNA Library

library_name
GSM749412: pGES-1_LIN-35_YL398_6-14-10_L1_rep2 _Input _CATT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
7742128
Reads aligned (%)
21.0
Duplicates removed (%)
7.7
Number of peaks
206 (qval < 1E-05)

ce10

Number of total reads
7742128
Reads aligned (%)
21.0
Duplicates removed (%)
7.7
Number of peaks
205 (qval < 1E-05)

Base call quality data from DBCLS SRA