Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Plin-35_LIN-35:GFP:FLAG whole animal
strain
YL409
Stage
L1
chip antibody
GFP

Sequenced DNA Library

library_name
GSM749399: Plin-35_LIN-35_YL409_4-12-10_L1_rep2.2_GFP_CATT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

ce11

Number of total reads
5992012
Reads aligned (%)
45.1
Duplicates removed (%)
24.3
Number of peaks
3777 (qval < 1E-05)

ce10

Number of total reads
5992012
Reads aligned (%)
45.1
Duplicates removed (%)
24.3
Number of peaks
3776 (qval < 1E-05)

Base call quality data from DBCLS SRA