SRX080086
GSM749397: Plin-35 LIN-35 YL409 4-9-10 L1 rep1 Input GTAT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Plin-35_LIN-35:GFP:FLAG whole animal
strain
YL409
Stage
L1
chip antibody
None

Sequenced DNA Library

library_name
GSM749397: Plin-35_LIN-35_YL409_4-9-10_L1_rep1_Input _GTAT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
5774885
Reads aligned (%)
61.6
Duplicates removed (%)
32.3
Number of peaks
118 (qval < 1E-05)

ce10

Number of total reads
5774885
Reads aligned (%)
61.6
Duplicates removed (%)
32.3
Number of peaks
116 (qval < 1E-05)

Base call quality data from DBCLS SRA