SRX080082
GSM749393: Pdpl-1 DPL-1 YL425 5-3-10 L1 rep2 GFP GTAT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Pdpl-1_DPL-1:GFP:FLAG whole animal
strain
YL425
Stage
L1
chip antibody
GFP

Sequenced DNA Library

library_name
GSM749393: Pdpl-1_DPL-1_YL425_5-3-10_L1_rep2 _GFP _GTAT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
6303653
Reads aligned (%)
40.3
Duplicates removed (%)
23.1
Number of peaks
3701 (qval < 1E-05)

ce10

Number of total reads
6303653
Reads aligned (%)
40.3
Duplicates removed (%)
23.1
Number of peaks
3702 (qval < 1E-05)

Base call quality data from DBCLS SRA