Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Pefl-1 EFL-1:GFP:FLAG whole animal
strain
YL424
Stage
L1
chip antibody
GFP

Sequenced DNA Library

library_name
GSM749389: Pefl-1_EFL-1_YL424_4-30-10_L1_rep2 _GFP_CATT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

ce11

Number of total reads
5303031
Reads aligned (%)
57.4
Duplicates removed (%)
35.0
Number of peaks
5769 (qval < 1E-05)

ce10

Number of total reads
5303031
Reads aligned (%)
57.4
Duplicates removed (%)
35.0
Number of peaks
5769 (qval < 1E-05)

Base call quality data from DBCLS SRA