SRX080077
GSM749388: Pefl-1 EFL-1 YL424 3-1-10 L1 rep1 Input TGCT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Pefl-1 EFL-1:GFP:FLAG whole animal
strain
YL424
Stage
L1
chip antibody
None

Sequenced DNA Library

library_name
GSM749388: Pefl-1_EFL-1_YL424_3-1-10_L1_rep1_Input_TGCT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
4626948
Reads aligned (%)
58.8
Duplicates removed (%)
5.1
Number of peaks
385 (qval < 1E-05)

ce10

Number of total reads
4626948
Reads aligned (%)
58.8
Duplicates removed (%)
5.1
Number of peaks
378 (qval < 1E-05)

Base call quality data from DBCLS SRA