Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Pmex-5 LIN-35:GFP:FLAG whole animal
strain
YL468
Stage
Young adult
chip antibody
GFP

Sequenced DNA Library

library_name
GSM749385: Pmex-5_LIN-35_YL468_10_18_10_yAd_rep2_GFP_CATT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

ce11

Number of total reads
3689890
Reads aligned (%)
20.4
Duplicates removed (%)
14.5
Number of peaks
169 (qval < 1E-05)

ce10

Number of total reads
3689890
Reads aligned (%)
20.4
Duplicates removed (%)
14.5
Number of peaks
167 (qval < 1E-05)

Base call quality data from DBCLS SRA